All nodes animated by default on animate enabled. = function ( node, i ) return true, // a function that determines whether the node should be animated. clusterMaker2 provides the capability to create a new network based on distances computed by the correlations between node attributes. = undefined, // easing of animation if enabled Integer duration of animation in ms if enabled function(a, b) return a.data('weight') - b.data('weight')īoolean whether to transition the node positions Js a sorting function to order the nodes e.g. Js function( node ), // returns row, col for element = undefined, // Applies a multiplicative factor (>0) to expand or compress the overall area that the nodes take upīoolean, uses all available space on false, uses minimal space on true = false, // Excludes the label when calculating node bounding boxes for the layout algorithm Thirdly, the black space in between the Control Panel and the Table Panel is your. Integer pixels extra spacing around nodes when avoidOverlap = true you can browse through selected nodes, edges, networks and their. = undefined, // constrain layout bounds x1, y1, x2, y2 or x1, y1, w, hīoolean prevents node overlap, may overflow boundingBox if not enough space )īoolean whether to fit the viewport to the graph ) # S3 method for class 'cytoscape' layout ( cytoscape, name = NULL, fit = TRUE, padding = 30, boundingBox = NULL, avoidOverlap = TRUE, avoidOverlapPadding = 10, nodeDimensionsIncludeLabels = FALSE, spacingFactor = NULL, condense = FALSE, rows = NULL, cols = NULL, position = NULL, sort = NULL, animate = FALSE, animationDuration = 500, animationEasing = NULL, animateFilter = NULL, ready = NULL, stop = NULL, transform = NULL. The ITM Probe model is selected using the eponymous dropdown box. ![]() Layout ( cytoscape, name = NULL, fit = TRUE, padding = 30, boundingBox = NULL, avoidOverlap = TRUE, avoidOverlapPadding = 10, nodeDimensionsIncludeLabels = FALSE, spacingFactor = NULL, condense = FALSE, rows = NULL, cols = NULL, position = NULL, sort = NULL, animate = FALSE, animationDuration = 500, animationEasing = NULL, animateFilter = NULL, ready = NULL, stop = NULL, transform = NULL. Since Cytoscape allows multiple edges of different types between the same source and destination nodes, CytoITMprobe collapses multiple edges in each direction into a single edge by appropriately summing their weights.
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